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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Ben Everly | 2nd | Mike Hankins | 3rd | 2nd |
| First Basemen | Juan Ortiz | 2nd | Nick Cordova | 7th | 1st |
| Second Basemen | Dusty Anderson | 11th | 22nd | 22nd | |
| Third Basemen | Ryan Forsythe | 15th | Jason Lewis | 3rd | 7th |
| Shortstops | Charlie Paquin | 12th | David Anast | 3rd | 5th |
| Left Fielders | Tim Hutchison | 15th | Joe Bacon | 10th | 15th |
| Center Fielders | Nick Wisniewski | 8th | John Hall | Tied for 7th | 7th |
| Right Fielders | Nelson Ziersch | 1st | Ryan Willin | 3rd | 1st |
| Starting Pitchers | Andy Weatherholt | 5th | Gregg Daugherty | 3rd | 4th |
| Relievers | Shane Kidd | 14th | Jaheim Johnson | 1st | 8th |
| Closers | Ken Allbaugh | 5th | Eddie O'Connor | 9th | 5th |
