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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Ben Everly | 2nd | Mike Hankins | 1st | 2nd |
| First Basemen | Juan Ortiz | 4th | George Kinder | 4th | 3rd |
| Second Basemen | Dusty Anderson | 7th | Justin Teehan | Tied for 7th | 6th |
| Third Basemen | Ryan Forsythe | 5th | Jason Lewis | Tied for 6th | 5th |
| Shortstops | Charlie Paquin | 8th | Jose Valdez | 1st | 2nd |
| Left Fielders | Tim Hutchison | 16th | Joe Bacon | 1st | 9th |
| Center Fielders | Nick Wisniewski | 5th | John Hall | 1st | 4th |
| Right Fielders | Nelson Ziersch | 1st | Nick Cordova | 3rd | 1st |
| Starting Pitchers | Andy Weatherholt | 3rd | Shalom Bruin | 3rd | 3rd |
| Relievers | Shane Kidd | 1st | Jeremy Ferraro | 4th | 1st |
| Closers | Shane Kidd | 8th | Eddie O'Connor | 5th | 5th |
